• Dental Materials Research Center
• Dental Implants Research Center

• Pediatric Cardiovascular Research Center
• Isfahan Cardiovascular Research Center
• Cardiac Rehabilitation Research Center
• Hypertension Research Center
• Heart Failure Research Center
• Applied Physiology Research Center
• Interventional Cardiology Research Center

Research Institute for Primordial Prevention of Non-Communicable Disease

• Child Growth and Development Research Center
• Environment Research Center
• Pediatric Inherited Diseases Research Center

• Acquired Immunodeficiency Research Center
• Anesthesiology and Critical Care Research Center
• Behavior Science Research Center
• Bioinformatics Research Center
• Biosensor Research Centre
• Cancer Prevention Research Center
• Clinical Toxicology Research Center
• Craniofacial and Cleft Research Center
• Endocrine & Metabolism Research Center
• Eye Research Center
• Food Security Research Center
• Gastroenterology and Liver Research Center
• Health information technology research center
• Health Management and Economics Research Center
• Infectious Diseases and Tropical Medicine Research Center
• Medical Education Research Center
• Kidney Diseases Research Center
• Medical Image and Signal Processing Research Center
• Metabolic Liver Disease Research Center
• Pharmaceutical Sciences Research Center
• Musculoskeletal Research Center
• Regenerative Medicine Research Center
• Neurosciences Research Center
• Nosocomial infection Research Center
• Novel Drug Delivery Research Center
• Nursing and Midwifery Care Research Center
• Skin Diseases and Leishmaniasis Research Center
• Social Determinants of Health research center
• Water & Electrolytes Research Center